GPU-FS-kNN: a software tool for fast and scalable kNN computation using GPUs

- Arefin, Ahmed Shamsul, Riveros, Carlos, Berretta, Regina, Moscato, Pablo

kNN-Borůvka-GPU: a fast and scalable MST construction from kNN graphs on GPU

- Arefin, Ahmed Shamsul, Riveros, Carlos, Berretta, Regina, Moscato, Pablo

kNN-MST-Agglomerative: a fast and scalable graph-based data clustering approach on GPU

- Arefin, Ahmed Shamsul, Riveros, Carlos, Berretta, Regina, Moscato, Pablo

Memetic algorithms in bioinformatics

- Berretta, Regina, Cotta, Carlos, Moscato, Pablo

Multivariate protein signatures of pre-clinical Alzheimer's disease in the Alzheimer's disease meuroimaging initiative (ADNI) plasma proteome dataset

- Johnstone, Daniel, Milward, Elizabeth A., Berretta, Regina, Moscato, Pablo

Unveiling clusters of RNA transcript pairs associated with markers of Alzheimer's disease progression

- Arefin, Ahmed Shamsul, Mathieson, Luke, Johnstone, Daniel, Berretta, Regina, Moscato, Pablo

Clustering nodes in large-scale biological networks using external memory algorithms

- Arefin, Ahmed Shamsul, Inostroza-Ponta, Mario, Mathieson, Luke, Berretta, Regina, Moscato, Pablo

Differences in abundances of cell-signalling proteins in blood reveal novel biomarkers for early detection of clinical Alzheimer's Disease

- Rocha de Paula, Mateus, Gómez Ravetti, Martín, Berretta, Regina, Moscato, Pablo

QAPgrid: a two level QAP-based approach for large-scale data analysis and visualization

- Inostroza-Ponta, Mario, Berretta, Regina, Moscato, Pablo

A transcription factor map as revealed by a genome-wide gene expression analysis of whole-blood mRNA transcriptome in multiple sclerosis

- Riveros, Carlos, Mellor, Drew, Vucic, Stephen, Stewart, Graeme J., Williams, David W., Scott, Rodney J., Lechner-Scott, Jeannette, Booth, David R., Moscato, Pablo, ANZgene Multiple Sclerosis Genetics Consortium, Gandhi, Kaushal S., McKay, Fiona C., Cox, Mathew B., Berretta, Regina, Vaezpour, S. Yahya, Inostroza-Ponta, Mario, Broadley, Simon A., Heard, Robert N.

Cancer biomarker discovery: the entropic hallmark

- Berretta, Regina, Moscato, Pablo

Uncovering molecular biomarkers that correlate cognitive decline with the changes of hippocampus' gene expression profiles in Alzheimer's disease

- Ravetti, Martin Gomez, Rosso, Osvaldo A., Berretta, Regina, Moscato, Pablo

Distinguishing childhood absence epilepsy patients from controls by the analysis of their background brain electrical activity (II): a combinatorial optimization approach for electrode selection

- Rosso, Osvaldo A., Mendes, Alexandre, Berretta, Regina, Rostas, John A., Hunter, Mick, Moscato, Pablo

Novel biomarkers for prostate cancer revealed by (α,β)-k-feature sets

- Ravetti, Martin Gómez, Berretta, Regina, Moscato, Pablo

Online support material for computer science honours program using Blackboard

- Berretta, Regina, Giggins, Helen

Combinatorial optimization models for finding genetic signatures from gene expression datasets

- Berretta, Regina, Costa, Wagner, Moscato, Pablo

Genetic signatures for a rodent model of Parkinson's disease using combinatorial optimization methods

- Hourani, Mou'Ath, Berretta, Regina, Mendes, Alexandre, Moscato, Pablo

An integrated QAP-based approach to visualize patterns of gene expression similarity

- Inostroza-Ponta, Mario, Mendes, Alexandre, Berretta, Regina, Moscato, Pablo

An integrated QAP-based approach to visualize patterns of gene expression similarity

- Inostroza-Ponta, Mario, Mendes, Alexandre, Berretta, Regina, Moscato, Pablo

Genetic biomarkers for brain hemisphere differentiation in Parkinson's Disease

- Hourani, Mou'Ath, Mendes, Alexandre, Berretta, Regina, Moscato, Pablo