Inferring structural variant cancer cell fraction
- Creator: Cmero, Marek , Yuan, Ke , Cao, Shaolong , Scarlett, Christopher J. , Christie, Elizabeth L. , Cun, Yupeng , Dawson, Kevin J. , Demeulemeester, Jonas , Dentro, Stefan C. , Deshwar, Amit G. , Donmez, Nilgun , Drews, Ruben M. , Eils, Roland , Ong, Cheng Soon , Fan, Y , Fittall, MW , Garsed, DW , Gerstung, M , Getz, G , Gonzalez, S , Ha, G , Haase, K , Imielinski, M , Jerman, L , Schröder, Jan , Ji, Y , Jolly, C , Kleinheinz, K , Lee, J , Lee-Six, H , Leshchiner, I , Livitz, D , Malikic, S , Martincorena, I , Mitchell, TJ , Adams, David J. , Morris, QD , Mustonen, V , Oesper, L , Peifer, M , Peto, M , Raphael, BJ , Rosebrock, D , Rubanova, Y , Sahinalp, SC , Salcedo, A , Anur, Pavana , Schlesner, M , Schumacher, SE , Sengupta, S , Shi, R , Shin, SJ , Spellman, PT , Spiro, O , Stein, LD , Tarabichi, M , Van Loo, P , Beroukhim, Rameen , Vembu, S , Vázquez-García, I , Wang, W , Wedge, DC , Wheeler, DA , Wintersinger, JA , Yang, TP , Yao, X , Yu, K , Zhu, H , Boutros, Paul C. , Corcoran, NM , Papenfuss, T , Hovens, CM , Markowetz, F , Macintyre, G , Aaltonen, LA , Abascal, F , Abeshouse, A , Aburatani, H , Adams, DJ , Bowtell, David D. L. , Agrawal, N , Ahn, KS , Ahn, SM , Aikata, H , Akbani, R , Akdemir, KC , Al-Ahmadie, H , Al-Sedairy, ST , Al-Shahrour, F , Alawi, M , Campbell, Peter J. , Albert, M , Aldape, K , Alexandrov, LB , Ally, A , Alsop, K , Alvarez, EG , Amary, F , Amin, SB , Aminou, B , Ammerpohl, O
- Resource Type: journal article
- Date: 2020
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples
- Creator: Bailey, Matthew H. , Perry, MD , Puiggros, M , Raine, KM , Rheinbay, E , Royo, R , Sahinalp, SC , Saksena, G , Sarrafi, I , Schlesner, M , Simpson, JT , Stebbings, L , Stewart, C , Stobbe, MD , Teague, JW , Tiao, G , Torrents, D , Wala, JA , Wang, J , Wang, W , Waszak, SM , Weischenfeldt, J , Wendl, MC , Werner, J , Wu, Z , Xue, H , Yakneen, S , Yamaguchi, TN , Ye, K , Yellapantula, VD , Yung, CK , Zhang, J , Pedersen, JS , Puiggròs, M , Wendl, M , Ellrot, K , Wheeler, DA , Getz, G , Gerstein, MB , Ding, L , Aaltonen, LA , Abascal, F , Abeshouse, A , Aburatani, H , Adams, DJ , Agrawal, N , Ahn, KS , Ahn, S-M , Aikata, H , Akbani, R , Akdemir, KC , Al-Ahmadie, H , Al-Sedairy, ST , Al-Shahrour, F , Alawi, M , Albert, M , Aldape, K , Alexandrov, LB , Ally, A , Alsop, K , Alvarez, EG , Amary, F , Amin, SB , Aminou, B , Ammerpohl, O , Anderson, MJ , Ang, Y , Antonello, D , Anur, P , Aparicio, S , Meyerson, William U. , Bailey, MH , Buchanan, A , Chiotti, K , Covington, K , Creason, A , Ellrott, K , Fan, Y , Foltz, S , Dursi, Lewis Jonathan , Hale, W , Haussler, D , Hess, JM , Hutter, CM , Kandoth, C , Kasaian, K , Kasapi, M , Larson, D , Leshchiner, I , Wang, Liang-Bo , Letaw, J , Ma, S , McLellan, MD , Men, Y , Mills, GB , Niu, B , Peto, M , Radenbaugh, A , Reynolds, SM , Dong, Guanlan , Sofia, H , Struck, AJ , Stuart, JM , Weinstein, JN , Wong, CK , Xi, L , Liang, Wen-Wei , Bieg, M , Boutros, PC , Buchhalter, I , Butler, AP , Chen, K , Chong, Z , Drechsel, O , Weerasinghe, Amila , Jonathan Dursi, L , Eils, R , Espiritu, SMG , Fulton, RS , Gao, S , Gelpi, JLL , Gonzalez, S , Li, Shantao , Gut, IG , Hach, F , Heinold, MC , Hinton, J , Hu, T , Huang, V , Huang, Y , Hutter, B , Jones, DR , Kelso, Sean , Jung, J , Jäger, N , Kim, HL , Kleinheinz, K , Kumar, S , Kumar, Y , Lalansingh, CM , Letunic, I , Livitz, D , Ma, EZ , Maruvka, YE , Mashl, RJ , Menzies, A , Milovanovic, A , Nielsen, MM , Ossowski, S , Paramasivam, N , Scarlett, Christopher J.
- Resource Type: journal article
- Date: 2020
Sex differences in oncogenic mutational processes
- Creator: Li, Constance H. , Bailey, MH , Bailey, PJ , Balasundaram, M , Balu, S , Bandopadhayay, P , Prokopec, Stephenie D. , Campbell, Peter J. , Scarlett, Christopher J. , Chang, David K. , Cooke, Sussanah L. , Deshpande, Vikram , Faltas, Bishoy M. , Faquin, William C. , Garraway, Levi , Getz, Gad , Grimmond, Sean M. , Haider, Syed , Sun, Ren X. , Hoadley, KA , Jiao, W , Kaiser, VB , Karlic, R , Kato, M , Kübler, K , Lazar, AJ , Li, CH , Louis, DN , Margolin, A , Yousif, Fouad , Martin, S , Nahal-Bose, HK , Nielsen, GP , Nik-Zainal, S , Omberg, L , P¿ng, C , Perry, MD , Polak, P , Rheinbay, E , Rubin, MA , Schmitz, Nathaniel , Semple, CA , Sgroi, DC , Shibata, T , Siebert, R , Smith, J , Stein, LD , Stobbe, MD , Sun, RX , Thai, K , Wright, DW , Al-Shahrour, Fatima , Wu, CL , Yuan, K , Zhang, J , Boutros, PC , Aaltonen, LA , Abascal, F , Abeshouse, A , Aburatani, H , Adams, DJ , Agrawal, N , Atwal, Gurnit , Ahn, KS , Ahn, SM , Aikata, H , Akbani, R , Akdemir, KC , Al-Ahmadie, H , Al-Sedairy, ST , Al-Shahrour, F , Alawi, M , Albert, M , Bailey, Peter J. , Aldape, K , Alexandrov, LB , Ally, A , Alsop, K , Alvarez, EG , Amary, F , Amin, SB , Aminou, B , Ammerpohl, O , Anderson, MJ , Biankin, Andrew V. , Ang, Y , Antonello, D , Anur, P , Aparicio, S , Appelbaum, EL , Arai, Y , Aretz, A , Arihiro, K , Ariizumi, SI , Armenia, J , Boutros, Paul C. , Arnould, L , Asa, S , Assenov, Y , Atwal, G , Aukema, S , Auman, JT , Aure, MR , Awadalla, P , Aymerich, M , Bader, GD
- Resource Type: journal article
- Date: 2020