http://nova.newcastle.edu.au/vital/access/services/Feed ${session.getAttribute("locale")} 5 Automatic cell segmentation in microscopic color images using ellipse fitting and watershed http://nova.newcastle.edu.au/vital/access/manager/Repository/uon:10081 This paper presents an efficient and innovative method for the automated counting of cells in a microscopic image. The performance of watershed-based algorithms for the segmentation of clustered cells has been well demonstrated. The strength of our algorithm lies in the fact that it incorporates knowledge of color in the image. Our method uses the watershed transform with iterative shape alignment and is shown to be more accurate in retaining cell shape. We report a sensitivity of 97% and specificity of 96% when all color bands are used. Our methods could be of value to computer-based systems designed to objectively interpret microscopic images, since they provide a means for accurate cell segmentation. 2013-04-05T01:03:54.331Z ]]> Thermal characteristics of the wake shear layers from a slightly heated circular cylinder http://nova.newcastle.edu.au/vital/access/manager/Repository/uon:12474 In this paper, we investigate the thermal characteristics of wake shear layers generated by a slightly heated circular cylinder. Measurements of the fluctuating temperature were made in the region x/d = 0.6 to x/d = 3 (where x is the downstream distance from the cylinder axis and d is the cylinder diameter) using a single cold-wire probe. The Reynolds number Re was varied in the range 2,600–8,600. For Re = 5,500, simultaneous measurements were made with a rake of 16 cold wires, aligned in the direction of the mean shear, at x/d = 2 and 3. The results indicate that the passive temperature can be an effective marker of various instabilities of the wake shear layers, including the Kelvin–Helmholtz (KH) instability. The temperature data have confirmed the approximate Re m dependence of the KH instability frequency (f KH) with different values of m over different ranges of Re, as reported previously in the literature. However, it is found that this power-law dependence is not exact, and a third-order polynomial dependence appears to fit the data well over the full range of Re. Importantly, it is found that the wake shear-layer instabilities can be grouped into three categories: (1) one with frequencies much smaller than the Bénard–Kármán-vortex shedding frequency, (2) one associated with the vortex shedding and (3) one related to the KH instability. The low-frequency shear-layer instabilities from both sides of the cylinder are in-phase, in contrast to the anti-phase high-frequency KH instabilities. Finally, the observed streamwise decrease in the mean KH frequency provides strong support for the occurrence of vortex pairing in wake shear layers from a circular cylinder, thus implying that both the wake shear layer and a mixing layer develop in similar fashion. 2013-01-23T03:40:04.898Z ]]> Automatic colonic polyp detection by the mapping using regional unit sphere http://nova.newcastle.edu.au/vital/access/manager/Repository/uon:7770 Colonic polyps appear like elliptical protrusions on the inner wall of the colon. The many proposed algorithms assumed the shape of a polyp as a spherical cap, so the algorithms are not flexible when the polyps are irregular shapes. In this paper, we propose a mapping using regional unit sphere (MuRUS) method to overcome the problem caused by unexpected polyp shapes. The MuRUS has shape invariant and size invariant properties. Our method was applied to colon CT images from 37 patients each having a prone and supine scan. There are 45 colonscopically confirmed polyps. The results obtained by our algorithm were compared with those gold standards. 100% of polyps >= 10mm in diameter were detected, 90% of polyps >= 6mm in diameter were detected and 70% of polyps < 6mm in diameter were detected at 7.0 FPs per patient. 2011-05-23T03:00:07.280Z ]]> Automatic colonic polyp detection by the mapping using regional unit sphere http://nova.newcastle.edu.au/vital/access/manager/Repository/uon:5964 Colonic polyps appear like elliptical protrusions on the inner wall of the colon. The many proposed algorithms assumed the shape of a polyp as a spherical cap, so the algorithms are not flexible when the polyps are irregular shapes. In this paper, we propose a mapping using regional unit sphere (MuRUS) method to overcome the problem caused by unexpected polyp shapes. The MuRUS has shape invariant and size invariant properties. Our method was applied to colon CT images from 37 patients each having a prone and supine scan. There are 45 colonscopically confirmed polyps. The results obtained by our algorithm were compared with those gold standards. 100% of polyps ≥ 10mm in diameter were detected, 90% of polyps ≥ 6mm in diameter were detected and 70% of polyps < 6mm in diameter were detected at 7.0 FPs per patient. 2010-04-27T04:42:35.865Z ]]>